Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915964.1_cds_XP_016465667.1_58600
CDS Infomation

[gene=LOC107788506] [db_xref=GeneID:107788506] [protein=lariat debranching enzyme-like] [protein_id=XP_016465667.1] [location=complement(join(2318..2403,3216..3311,10069..10208,10289..10407,10493..10675,14060..14253,14475..14596,14717..14874,15341..15463))] [gbkey=CDS]
Sequence

ATGAGGATAGCAGTAGAAGGGTGTATGCACGGAGACTTGGATAATGTCTATGCCACCCTA
TTGCAGTTGCAAGAAGTTGAGAATATAAAGATTGATCTCCTTTTATGCTGCGGTGACTTT
CAGGCTGTTAGGAATGAGAAGGATCTGGAAAGCTTAAACGCGCCACTTAAATACCGGAGC
ATGAACTCTTTCTGGAAGTATTACTCAGGAGAGAAAGTAGCACCATTTCCAACTATATTT
ATTGGAGGAAACCATGAAGCATCCAATTACCTTTGGGAATTGTACTATGGAGGATGGGCA
GCACCTCAGATATACTTCCTTGGATTTGCTGGAGTAATCAAGTTTGGCAACATTCGTATT
GGTGGCCTTTCCGGAATTTATAAATCACACGATTACAATCGAGGGCACTATGAGAAGCTG
CCTTATAATCAACGGGATATTCGATCTATTTATCATGTTCGCGAGTATGATGTTCACAAG
CTCTTGGAAGTTGAGGAACCAATTGATATTTTTCTTTCACATGACTGGCCTGTTGGCATC
ACTGACTGTGGGAACTTGAAAGCTCTTCTTCGTCAGAAGCCTTTCTTTGAACAAGAGATT
CAGGAAGGAACTCTGGGAAGCAGACCTGCTGCAGAATTACTGGCAAAGTTGAGGCCTTCT
TACTGGTTTTCTGCACATCTGCACTGCAAATTTGCTGCTTTAGTTCAGCATGAGAAGGAT
GGTCCTTCCACAAAGTTTCTTGCCCTTGACAAGTGCCTCCCTGGTAGAAAGTTTTTGCAG
GTTATTGAAATTGAGTCCGGACCAGGACCTCATGAACTTCAATTTGATGAAGAATGGTTG
GCAATCACAAGAAAGTATAATGCTGTCTTGCCCTTGACAATCAGGCGTGCAAACTATAGT
GATGTACATCTTGACACAGAACAATGCCACCAGTTTGTAAGAAATAAGCTGCAGACAAGG
GGATCCAAACCATTTGAATTTGTTCAGACTGCACCTTGCTACAATCCTTCTCACCCTGTT
GCTAATGGTGTCTTCCACGGTTTCTATAAAAACCCTCAGACAGAAGCTCTATTACAGTTT
CTAGAACTCGCGTATCTTCTTAATAAAATGCCAGAATCAAGGGAGCCTGCTGCAGGTTCC
TTTGATTACGAGAGTGAAGATATACCCATAGATGACGTGGACGTGGACGATATAAAACAA
GTAGACTCGGAAGATGCTTAA

Peptide Sequence

PEP ID

XP_016465667.1
PEP Infomation

PREDICTED: lariat debranching enzyme-like [Nicotiana tabacum]
Sequence

MRIAVEGCMHGDLDNVYATLLQLQEVENIKIDLLLCCGDFQAVRNEKDLESLNAPLKYRS
MNSFWKYYSGEKVAPFPTIFIGGNHEASNYLWELYYGGWAAPQIYFLGFAGVIKFGNIRI
GGLSGIYKSHDYNRGHYEKLPYNQRDIRSIYHVREYDVHKLLEVEEPIDIFLSHDWPVGI
TDCGNLKALLRQKPFFEQEIQEGTLGSRPAAELLAKLRPSYWFSAHLHCKFAALVQHEKD
GPSTKFLALDKCLPGRKFLQVIEIESGPGPHELQFDEEWLAITRKYNAVLPLTIRRANYS
DVHLDTEQCHQFVRNKLQTRGSKPFEFVQTAPCYNPSHPVANGVFHGFYKNPQTEALLQF
LELAYLLNKMPESREPAAGSFDYESEDIPIDDVDVDDIKQVDSEDA

Transcript Sequence

Gene sequence data has not been registered.